Package: Eagle
Type: Package
Title: Multiple Locus Association Mapping on a Genome-Wide Scale
Version: 1.0.3
Authors@R: c(
           person("Andrew", "George", role=c("aut", "cre"), email="andrew.george@csiro.au"),
           person("Joshua", "Bowden", role="ctb"),
           person("Ryan", "Stephenson", role="ctb"),
           person("Hyun", "Kang", role="ctb"),
           person("Noah", "Zaitlen", role="ctb"),
           person("Claire", "Wade", role="ctb"),
           person("Andrew", "Kirby", role="ctb"),
           person("David", "Heckerman", role="ctb"),
           person("Mark", "Daly", role="ctb"),
           person("Eleazar", "Eskin", role="ctb") )
Maintainer: Andrew George <andrew.george@csiro.au>
Author: Andrew George [aut, cre], Joshua Bowden [ctb], Ryan Stephenson
        [ctb], Hyun Kang [ctb], Noah Zaitlen [ctb], Claire Wade [ctb],
        Andrew Kirby [ctb], David Heckerman [ctb], Mark Daly [ctb],
        Eleazar Eskin [ctb]
Description: An implementation of multiple-locus association mapping on
        a genome-wide scale. 'Eagle' can handle inbred or outbred study
        populations, populations of arbitrary unknown complexity, and
        data larger than the memory capacity of the computer. Since
        'Eagle' is based on linear mixed models, it is best suited to
        the analysis of data on continuous traits. However, it can
        tolerate non-normal data. 'Eagle' reports, as its findings, the
        best set of snp in strongest association with a trait. To
        perform an analysis, run 'OpenGUI()'. This opens a web browser
        to the menu-driven user interface for the input of data, and
        for performing genome-wide analysis.
License: GPL-3
Depends: R (>= 3.4)
Imports: matrixcalc, shiny, shinythemes, shinyBS, shinyjs, stats,
        utils, parallel, data.table, tcltk
LinkingTo: RcppEigen, Rcpp
Roxygen: list(wrap=FALSE)
ByteCompile: TRUE
NeedsCompilation: yes
URL: http://eagle.r-forge.r-project.org
Contact: eaglehelp@csiro.au
Config/pak/sysreqs: cmake make libuv1-dev zlib1g-dev
Repository: https://r-forge.r-universe.dev
Date/Publication: 2020-09-18 04:17:09 UTC
RemoteUrl: https://github.com/r-forge/eagle
RemoteRef: HEAD
RemoteSha: 7c939a2bfa7cd6add325467c9581ce27b15ebb39
RemoteSubdir: pkg
Packaged: 2026-06-12 07:17:23 UTC; root