{
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  "Date": "2025-04-06",
  "Title": "Basic Functions for Pre-Processing Microarrays",
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  "Description": "Provides classes to pre-process microarray gene expression\ndata as part of the OOMPA collection of packages described at\n<http://oompa.r-forge.r-project.org/>.",
  "License": "Apache License (== 2.0)",
  "LazyLoad": "yes",
  "biocViews": "Microarray, PreProcessing",
  "URL": "http://oompa.r-forge.r-project.org/",
  "Repository": "https://r-forge.r-universe.dev",
  "Date/Publication": "2026-05-22 18:40:06 UTC",
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    "Channel",
    "channelize",
    "ChannelType",
    "CompleteChannel",
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    "f.cord",
    "f.oneway.rankings",
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    "PIPELINE.MDACC.DEFAULT",
    "PIPELINE.STANDARD",
    "PROC.BACKGROUND",
    "PROC.CORRECTED.SIGNAL",
    "PROC.GLOBAL.NORMALIZATION",
    "PROC.LOG.TRANSFORM",
    "PROC.MEDIAN.EXPRESSED.NORMALIZATION",
    "PROC.NEG.CORRECTED.SIGNAL",
    "PROC.SD.SIGNAL",
    "PROC.SIGNAL",
    "PROC.SIGNAL.TO.NOISE",
    "PROC.SUBSET.MEAN.NORMALIZATION",
    "PROC.SUBSET.NORMALIZATION",
    "PROC.SUBTRACTOR",
    "PROC.THRESHOLD",
    "process",
    "setDesign"
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    {
      "page": "b04-0-Channel-class",
      "title": "Class \"Channel\"",
      "topics": [
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        "Channel-class",
        "hist,Channel-method",
        "image,Channel-method",
        "plot,Channel,missing-method",
        "print,Channel-method",
        "show,Channel-method",
        "summary,Channel-method"
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    },
    {
      "page": "b07-1-channelize-method",
      "title": "Method \"channelize\"",
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        "channelize",
        "channelize,ANY-method",
        "channelize-method"
      ]
    },
    {
      "page": "b03-0-ChannelType-class",
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        "ChannelType-class",
        "getDesign",
        "print,ChannelType-method",
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        "show,ChannelType-method",
        "summary,ChannelType-method"
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      "page": "b07-0-CompleteChannel-class",
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        "as.data.frame,CompleteChannel-method",
        "channelize,CompleteChannel-method",
        "CompleteChannel",
        "CompleteChannel-class",
        "image,CompleteChannel-method",
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        "print,CompleteChannel-method",
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        "PROC.SIGNAL.TO.NOISE",
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        "show,CompleteChannel-method",
        "summary,CompleteChannel-method"
      ]
    },
    {
      "page": "b00-0-generics-method",
      "title": "Methods \"process\" and \"analyze\"",
      "topics": [
        "analyze",
        "analyze,ANY-method",
        "process",
        "process,ANY-method"
      ]
    },
    {
      "page": "b01-0-graph-utility",
      "title": "OOMPA graphical utility functions",
      "topics": [
        "ellipse",
        "f.qq",
        "f.qt"
      ]
    },
    {
      "page": "b01-1-matrix-utility",
      "title": "OOMPA Matrix Utility Functions",
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        "fliplr",
        "flipud"
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    {
      "page": "b06-0-Pipeline-class",
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        "Pipeline",
        "Pipeline-class",
        "PIPELINE.MDACC.DEFAULT",
        "PIPELINE.STANDARD",
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        "summary,Pipeline-method"
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        "PROC.GLOBAL.NORMALIZATION",
        "PROC.LOG.TRANSFORM",
        "PROC.MEDIAN.EXPRESSED.NORMALIZATION",
        "PROC.SUBSET.MEAN.NORMALIZATION",
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    },
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        "f.cord",
        "f.oneway.rankings"
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  "_rundeps": [
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      "created": "2014-02-10 15:51:10",
      "modified": "2017-04-25 13:56:14",
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