{
  "_id": "6a37c2193efcd9bda442d070",
  "Package": "oompaBase",
  "Version": "3.2.11",
  "Date": "2026-01-09",
  "Title": "Class Unions, Matrix Operations, and Color Schemes for OOMPA",
  "Authors@R": "person(given = c(\"Kevin\", \"R.\"),\nfamily = \"Coombes\",\nrole = c(\"aut\", \"cre\"),\nemail = \"krc@silicovore.com\")",
  "Description": "Provides the class unions that must be preloaded in order\nfor the basic tools in the OOMPA (Object-Oriented Microarray\nand Proteomics Analysis) project to be defined and loaded. It\nalso includes vectorized operations for row-by-row means,\nvariances, and t-tests. Finally, it provides new color schemes.\nDetails on the packages in the OOMPA project can be found at\n<http://oompa.r-forge.r-project.org/>.",
  "License": "Apache License (== 2.0)",
  "LazyLoad": "yes",
  "biocViews": "Infrastructure",
  "URL": "http://oompa.r-forge.r-project.org/",
  "Repository": "https://r-forge.r-universe.dev",
  "Date/Publication": "2026-05-22 18:40:06 UTC",
  "RemoteUrl": "https://github.com/r-forge/oompa",
  "RemoteRef": "HEAD",
  "RemoteSha": "969e77c65694e77068421e66612b9fc687a5a023",
  "RemoteSubdir": "pkg/oompaBase",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-21 10:48:47 UTC",
    "User": "root"
  },
  "Author": "Kevin R. Coombes [aut, cre]",
  "Maintainer": "Kevin R. Coombes <krc@silicovore.com>",
  "MD5sum": "62a95ca6deefaaacd91904d46b9f825b",
  "_user": "r-forge",
  "_type": "src",
  "_file": "oompaBase_3.2.11.tar.gz",
  "_fileid": "a8e75946a3c9209dc7f56ecfbe58c6f5418c65be56775a2c3705011aac21b530",
  "_filesize": 247008,
  "_sha256": "a8e75946a3c9209dc7f56ecfbe58c6f5418c65be56775a2c3705011aac21b530",
  "_created": "2026-06-21T10:48:47.000Z",
  "_published": "2026-06-21T10:51:05.294Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 82563661790,
      "time": 105,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7774550646"
    },
    {
      "job": 82563661798,
      "time": 100,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7774550032"
    },
    {
      "job": 82563661805,
      "time": 68,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7774546287"
    },
    {
      "job": 82563661800,
      "time": 81,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7774547671"
    },
    {
      "job": 82563444736,
      "time": 208,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7774538298"
    },
    {
      "job": 82563661818,
      "time": 87,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7774548505"
    },
    {
      "job": 82563661796,
      "time": 69,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7774546214"
    },
    {
      "job": 82563661802,
      "time": 74,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7774546868"
    },
    {
      "job": 82563661803,
      "time": 55,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7774544788"
    }
  ],
  "_buildurl": "https://github.com/r-universe/r-forge/actions/runs/27901847328",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/r-forge/oompa",
  "_commit": {
    "id": "969e77c65694e77068421e66612b9fc687a5a023",
    "author": "krcoombes (Kevin Coombes) <kevin.r.coombes@gmail.com>",
    "committer": "krcoombes (Kevin Coombes) <kevin.r.coombes@gmail.com>",
    "message": "Added XKCD color names.\n\ngit-svn-id: svn://svn.r-forge.r-project.org/svnroot/oompa@707 edb9625f-4e0d-4859-8d74-9fd3b1da38cb\n",
    "time": 1779475206
  },
  "_maintainer": {
    "name": "Kevin R. Coombes",
    "email": "krc@silicovore.com"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.4",
      "role": "Depends"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "graphics",
      "role": "Imports"
    },
    {
      "package": "grDevices",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "cluster",
      "role": "Imports"
    }
  ],
  "_owner": "r-forge",
  "_selfowned": true,
  "_usedby": 20,
  "_updates": [
    {
      "week": "2025-36",
      "n": 1
    },
    {
      "week": "2025-40",
      "n": 1
    },
    {
      "week": "2025-45",
      "n": 2
    },
    {
      "week": "2025-46",
      "n": 1
    },
    {
      "week": "2025-47",
      "n": 2
    },
    {
      "week": "2026-02",
      "n": 1
    },
    {
      "week": "2026-18",
      "n": 8
    },
    {
      "week": "2026-19",
      "n": 6
    },
    {
      "week": "2026-21",
      "n": 1
    }
  ],
  "_tags": [],
  "_topics": [
    "infrastructure"
  ],
  "_stars": 0,
  "_contributors": [
    {
      "user": "krcoombes",
      "count": 582,
      "uuid": 5930440
    },
    {
      "user": "lmsstudios",
      "count": 101,
      "uuid": 97995137
    },
    {
      "user": "yamachan18",
      "count": 19,
      "uuid": 81639585
    },
    {
      "user": "theussl",
      "count": 1,
      "uuid": 22165873
    }
  ],
  "_userbio": {
    "uuid": 75573726,
    "type": "organization",
    "name": " R-Forge",
    "followers": 27,
    "description": "git-svn mirrors from R-Forge"
  },
  "_downloads": {
    "count": 2872,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/oompaBase"
  },
  "_devurl": "https://github.com/r-forge/oompa",
  "_searchresults": 48,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/oompaBase.html",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/r-forge/oompa",
  "_realowner": "r-forge",
  "_cranurl": true,
  "_releases": [
    {
      "version": "3.2.4",
      "date": "2017-07-11"
    },
    {
      "version": "3.2.5",
      "date": "2017-11-20"
    },
    {
      "version": "3.2.6",
      "date": "2018-05-17"
    },
    {
      "version": "3.2.7",
      "date": "2019-04-23"
    },
    {
      "version": "3.2.8",
      "date": "2019-05-06"
    },
    {
      "version": "3.2.9",
      "date": "2019-08-24"
    },
    {
      "version": "3.2.10",
      "date": "2025-04-03"
    },
    {
      "version": "3.2.11",
      "date": "2026-01-11"
    }
  ],
  "_exports": [
    "as.data.frame",
    "bluescale",
    "blueyellow",
    "colorCode",
    "ColorCodedPair",
    "ColorCoding",
    "cyanyellow",
    "grayscale",
    "greenscale",
    "greyscale",
    "hist",
    "image",
    "jetColors",
    "matrixMean",
    "matrixPairedT",
    "matrixT",
    "matrixUnequalT",
    "matrixVar",
    "oompaColor",
    "plot",
    "print",
    "redgreen",
    "redscale",
    "summary",
    "wheel"
  ],
  "_help": [
    {
      "page": "b02-1-ColorCodedPair-class",
      "title": "Class \"ColorCodedPair\"",
      "topics": [
        "ColorCodedPair",
        "ColorCodedPair-class",
        "plot,ColorCodedPair,missing-method"
      ]
    },
    {
      "page": "b02-0-ColorCoding-class",
      "title": "Class \"ColorCoding\"",
      "topics": [
        "colorCode",
        "ColorCoding",
        "ColorCoding-class"
      ]
    },
    {
      "page": "z02-colorSchemes",
      "title": "Color Schemes for Images and Heat Maps",
      "topics": [
        "bluescale",
        "blueyellow",
        "cyanyellow",
        "grayscale",
        "greenscale",
        "greyscale",
        "jetColors",
        "redgreen",
        "redscale",
        "wheel"
      ]
    },
    {
      "page": "z01-matrixT",
      "title": "Multiple T Tests by Matrix Multiplication",
      "topics": [
        "matrixMean",
        "matrixPairedT",
        "matrixT",
        "matrixUnequalT",
        "matrixVar"
      ]
    },
    {
      "page": "numnull",
      "title": "Class \"numeric or NULL\"",
      "topics": [
        "numeric or NULL-class"
      ]
    },
    {
      "page": "z02-2-semanticColors",
      "title": "Pre-defined colors for microarray plots",
      "topics": [
        "oompaColor"
      ]
    }
  ],
  "_rundeps": [
    "cluster"
  ],
  "_vignettes": [
    {
      "source": "oompa.Rnw",
      "filename": "oompa.pdf",
      "title": "OOMPA",
      "engine": "utils::Sweave",
      "headings": [
        "Introduction",
        "Getting Started",
        "Color Schemes",
        "Row-by-row Matrix Operations",
        "Color Coded Graphs"
      ],
      "created": "2014-02-10 15:51:10",
      "modified": "2019-08-19 17:48:24",
      "commits": 4
    }
  ],
  "_score": 7.348940687488482,
  "_indexed": true,
  "_nocasepkg": "oompabase",
  "_universes": [
    "r-forge"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "3.2.11",
      "date": "2026-06-21T10:50:40.000Z",
      "distro": "noble",
      "commit": "969e77c65694e77068421e66612b9fc687a5a023",
      "fileid": "42d70626c4047a520e15c2675aeba3062a62552a24c73dff29830169591ea285",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/r-forge/actions/runs/27901847328"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "3.2.11",
      "date": "2026-06-21T10:50:35.000Z",
      "distro": "noble",
      "commit": "969e77c65694e77068421e66612b9fc687a5a023",
      "fileid": "e5d3c30aeb4da9cb32d722a5e83e640d7dd89a91d5b0261afc71157e4d29aae0",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/r-forge/actions/runs/27901847328"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "3.2.11",
      "date": "2026-06-21T10:50:08.000Z",
      "commit": "969e77c65694e77068421e66612b9fc687a5a023",
      "fileid": "22bee4883c5af9bb1612d63aa42f5e306d1c733dc47411c16e1ee2a01b4ac8ff",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/r-forge/actions/runs/27901847328"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "3.2.11",
      "date": "2026-06-21T10:50:17.000Z",
      "commit": "969e77c65694e77068421e66612b9fc687a5a023",
      "fileid": "92e51bce441ab06227078113495f9c414fa8ff9e642199c07f80918595b8f42e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/r-forge/actions/runs/27901847328"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "3.2.11",
      "date": "2026-06-21T10:50:34.000Z",
      "commit": "969e77c65694e77068421e66612b9fc687a5a023",
      "fileid": "17de2b419a918cbd389c8e8fa9b341daed0bf0be92ed5526be8726fd91857c47",
      "status": "success",
      "buildurl": "https://github.com/r-universe/r-forge/actions/runs/27901847328"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "3.2.11",
      "date": "2026-06-21T10:50:00.000Z",
      "commit": "969e77c65694e77068421e66612b9fc687a5a023",
      "fileid": "be7f5413321151bbf6524f52d0328c8afbe427d58694eb6943d66507712b5ec7",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/r-forge/actions/runs/27901847328"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "3.2.11",
      "date": "2026-06-21T10:50:04.000Z",
      "commit": "969e77c65694e77068421e66612b9fc687a5a023",
      "fileid": "1ece896e1b69fe7de799201a28cf98328b2d8cf8c9cdc71244f1ef9d2cdca2de",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/r-forge/actions/runs/27901847328"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "3.2.11",
      "date": "2026-06-21T10:49:47.000Z",
      "commit": "969e77c65694e77068421e66612b9fc687a5a023",
      "fileid": "478e83663d096a1f80bf0995bed0dc016cf3e5d633201d1d8cf14a163457eba3",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/r-forge/actions/runs/27901847328"
    }
  ]
}