Package: plasma
Title: Partial LeAst Squares for Multiomic Analysis
Version: 1.1.5
Date: 2025-05-08
Authors@R: c(person("Kevin R.", "Coombes", role = c("cre", "aut"),
                    email = "krc@silicovore.com"),
             person("Kyoko", "Yamaguchi", role = "aut"),
             person("Salma", "Abdelbaky", role = "aut"))
Description: Contains tools for supervised analyses of incomplete,
        overlapping multiomics datasets. Applies partial least squares
        in multiple steps to find models that predict survival
        outcomes. See Yamaguchi et al. (2023)
        <doi:10.1101/2023.03.10.532096>.
Depends: R (>= 3.5.0)
Imports: methods, stats, graphics, survival, pls, plsRcox, Polychrome
        (>= 1.5.0), viridisLite, beanplot, oompaBase
Suggests: R.rsp, tidyr, ClassDiscovery
License: Apache License (== 2.0)
LazyLoad: yes
URL: http://oompa.r-forge.r-project.org/
VignetteBuilder: R.rsp
Config/pak/sysreqs: cmake libfreetype6-dev libglpk-dev libglu1-mesa-dev
        make texlive libicu-dev libpng-dev libuv1-dev libxml2-dev
        libgl1-mesa-dev zlib1g-dev
Repository: https://r-forge.r-universe.dev
Date/Publication: 2026-07-06 14:32:48 UTC
RemoteUrl: https://github.com/r-forge/oompa
RemoteRef: HEAD
RemoteSha: a557cfbcefd96d0db6d90fb517372fcd57a68313
RemoteSubdir: pkg/plasma
NeedsCompilation: no
Packaged: 2026-07-06 16:50:23 UTC; root
Author: Kevin R. Coombes [cre, aut],
  Kyoko Yamaguchi [aut],
  Salma Abdelbaky [aut]
Maintainer: Kevin R. Coombes <krc@silicovore.com>