Package: tramME
Title: Transformation Models with Mixed Effects
Version: 1.0.4
Date: 2023-04-04
Authors@R: c(person("Balint", "Tamasi", role = c("aut", "cre"),
                    email = "balint.tamasi@uzh.ch",
                    comment = c(ORCID = "0000-0002-2629-7362")),
             person("Torsten", "Hothorn",  role = "ctb",
                    email = "Torsten.Hothorn@R-project.org",
                    comment = c(ORCID = "0000-0001-8301-0471")))
Description: Likelihood-based estimation of mixed-effects
        transformation models using the Template Model Builder ('TMB',
        Kristensen et al., 2016) <doi:10.18637/jss.v070.i05>. The
        technical details of transformation models are given in Hothorn
        et al. (2018) <doi:10.1111/sjos.12291>. Likelihood
        contributions of exact, randomly censored (left, right,
        interval) and truncated observations are supported. The random
        effects are assumed to be normally distributed on the scale of
        the transformation function, the marginal likelihood is
        evaluated using the Laplace approximation, and the gradients
        are calculated with automatic differentiation (Tamasi &
        Hothorn, 2021) <doi:10.32614/RJ-2021-075>. Penalized smooth
        shift terms can be defined using 'mgcv'.
Depends: R (>= 3.6.0), tram (>= 0.3.2), mlt (>= 1.1.0)
Imports: alabama, lme4 (>= 1.1.19), Matrix, methods, mgcv (>= 1.8.34),
        nlme, TMB (>= 1.7.15), stats, variables (>= 1.0.2), basefun (>=
        1.0.6), numDeriv, MASS, coneproj, mvtnorm
Suggests: multcomp, parallel, survival, knitr, coxme, ordinal,
        ordinalCont, gamm4, gamlss.dist, glmmTMB, xtable
LinkingTo: TMB, RcppEigen
VignetteBuilder: knitr
License: GPL-2
URL: http://ctm.R-forge.R-project.org
Encoding: UTF-8
RoxygenNote: 7.2.3
NeedsCompilation: yes
Packaged: 2026-06-23 20:48:58 UTC; root
Author: Balint Tamasi [aut, cre]
        (<https://orcid.org/0000-0002-2629-7362>), Torsten Hothorn
        [ctb] (<https://orcid.org/0000-0001-8301-0471>)
Maintainer: Balint Tamasi <balint.tamasi@uzh.ch>
Config/pak/sysreqs: cmake
Repository: https://r-forge.r-universe.dev
Date/Publication: 2026-05-22 09:46:49 UTC
RemoteUrl: https://github.com/r-forge/ctm
RemoteRef: HEAD
RemoteSha: 6cd3bd0ce8570d012a6fdd3955b10c8140794b84
RemoteSubdir: pkg/tramME